class Bio::DataFrame

• Bio::DataFrame
• Reference
• Object

Overview

DataFrame class

Represents, i.e., the result of omics experiments, organized features vs observations with same notation that pandas, contaning only numerical data except in the header and/or the index. Data is represented with num.cr tensor for perfomance.

Defined in:

omics/dataframe.cr

Constructors

• .new(data = nil, index : Nil | Array(String) = nil, columns : Nil | Array(String) = nil)

  Creates a new DataFrame object.

Class Method Summary

• .from_csv(path : String, delimiter = nil, header = false, index = false)

  Load methods

• .from_json(path : String)

Instance Method Summary

• #apply
• #columns : Array(String) | Nil
• #columns=(columns : Array(String) | Nil)
• #corr
• #cov
• #data
• #distance_matrix
• #filter
• #iloc
• #index : Array(String) | Nil
• #index=(index : Array(String) | Nil)
• #loc

  Search methods

• #max
• #mean
• #median
• #min
• #std
• #to_csv

  Save methods

• #to_json
• #transpose
• #var

Constructor Detail

Class Method Detail

Instance Method Detail