Top Level Namespace
Array
Char
Chem
- ArrayView
- Atom
- AtomCollection
- AtomView
- Bias
- Bond
  - Kind
- BondArray
- Chain
- ChainCollection
- ChainView
- Constraint
- Cube
  - Reader
  - Writer
- DFTB
  - Gen
    - Reader
    - Writer
- DX
  - Reader
  - Writer
- Element
- Error
- IO
  - FileFormat
  - FileType
  - ParseException
  - Reader
  - TextIO
  - Writer
- Lattice
- Linalg
  - Error
  - Matrix
- Mol2
  - Reader
  - Writer
- PDB
  - Hybrid36
  - Reader
  - Writer
- PeriodicTable
- Protein
  - AminoAcid
  - AminoAcids
  - DSSP
  - PSIQUE
    - SecondaryStructureBlender
  - SecondaryStructure
  - SecondaryStructureCalculator
  - SecondaryStructureType
  - Sequence
  - Stride
    - Writer
- PyMOL
  - Writer
- Residue
  - Kind
- ResidueCollection
- ResidueView
- Spatial
  - AffineTransform
    - ScalingFactors
  - Basis
  - Bounds
  - CoordinatesProxy
  - Error
  - Grid
    - Dimensions
    - Info
    - Location
    - Reader
  - HlxParams
  - KDTree
  - NotPeriodicError
  - PBC
  - Quaternion
  - Size
  - Vector
- Structure
  - Builder
  - Experiment
    - Method
  - Reader
- Topology
  - AtomType
  - BondType
  - MatchData
  - Patcher
  - Perception
  - ResidueType
  - Templates
    - Builder
      - ParseException
    - Detector
    - Error
- VASP
  - Chgcar
    - Reader
    - Writer
  - GridReader
  - GridWriter
  - Locpot
    - Reader
    - Writer
  - Poscar
    - Reader
    - Writer
- VMD
  - Writer
- XYZ
  - Reader
  - Writer
Colorize
- ColorRGB
Indexable
Int
Number
Range
Slice

Built with Crystal 1.9.2
2023-10-08 17:31:40 UTC

module Chem::Topology

Defined in:

chem/topology/match_data.cr
chem/topology/patcher.cr
chem/topology/templates/amino.cr
chem/topology/types.cr